Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
8
single cell RNA-seq
Assay category
67
Transcription
Date released
84
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
Available data
2516
bam
2385
bigWig
1339
tsv
1279
bed narrowPeak
759
fastq
670
bigBed narrowPeak
338
tagAlign
262
bed broadPeak
241
bed bed3+
225
bigBed broadPeak
153
zippedFastqFolder
151
txt
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
13
hic
11
bedpe bed3+
6
bed bed3
4
hdf5
3
csv
1
bedpe
1
tagAlign bed3+
1
tar
Organism
151
Homo sapiens
Biosample type
151
tissue
3
in vitro differentiated cells
1
cell line
0
primary cell
Organ
88
bone element
57
kidney
6
pancreas
4
skeleton
Project
151
AMP
Lab
88
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
audit script error
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
151 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
single cell RNA-seq
tissue
bone element
84
kidney
49
8
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
See all biosamples
Download