Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

BIOSAMPLE

	ASSAY
3039 results Clear Filters	total RNA-seq	ChIP-seq	ATAC-seq	single cell RNA-seq	DNase-seq	RNA microarray	WGBS	snATAC-seq	pCHi-C	Hi-C	small RNA-seq	RRBS	MeRIP-seq	FAIRE-seq	snDrop-seq	DNAme array
tissue
adipose tissue	382		3						1
islet of Langerhans	195	43	48					7	4	3		1	4
liver	167	78	20	1			2		1	1	1
kidney	49	27	75	64	13			6		1		1		1
bone element						84
heart left ventricle	3	35	2	18	3		4		1	1		1
bone tissue	58
coronary artery	1	5	36		2
tibial nerve	5	35	1		2
heart	4	14		1	18		1			1	1
subcutaneous abdominal adipose tissue		36					3
heart right ventricle	1	13		17	1		2		1	1
skeletal muscle tissue	1	22	1	1				1			1	2
tibial artery	1	23	1		2
brain	1	11	1		12							1
right cardiac atrium		6		18			1		1
layer of hippocampus		23
aorta	1	13		4			2		1	1
muscle of leg		7			13		1
retina	3		15		3
lung				9				10	1
ascending aorta	2	16			1
left cardiac atrium				18	1
thoracic aorta	2	16	1
caudate nucleus	1	15			1
muscle of arm					17
substantia nigra	1	16
temporal lobe	1	15									1
endocrine pancreas		16
right atrium auricular region	3	10	1		2
angular gyrus		15
cingulate gyrus		14
middle frontal area 46		14
pigmented layer of retina	2		12
germinal matrix		12
pancreas	2				2			4	1	1		1
renal cortex interstitium					11
renal pelvis					10
right kidney					10
body of pancreas	3	2			2						2
left kidney					9
subcutaneous adipose tissue	7					1					1
cerebellum (Hemisphere)	1	4			1						1
omental fat pad	5				1						1
right lobe of liver	3				1		1				2
frontal cortex	2				2						1			1
gastrocnemius medialis	1									4
psoas muscle	2								1	2
aortic valve				4
left renal cortex interstitium					4
left renal pelvis					4
pulmonary valve				4
putamen	1	2			1
right renal pelvis					4
superior frontal gyrus		4
tricuspid valve				4
Ammon's horn	1				1				1
cardiac atrium	1			2
cardiac ventricle	1			2
central medial thalamic nucleus		3
middle frontal gyrus		2			1
middle temporal gyrus		3
mitral valve				3
occipital lobe	1				1						1
right renal cortex interstitium					3
visceral abdominal adipose tissue	3
acetabular part of hip bone	1		1
amygdala	1	1
anterior cingulate gyrus		2
cerebellum	2
diencephalon	1										1
gyrus rectus		2
hypothalamus	1	1
ilium	1		1
interventricular septum				2
ischium	1		1
medial globus pallidus		2
metanephros	1										1
nucleus accumbens	1	1
occipital pole		2
parietal lobe	1										1
pons		1			1
posterior cingulate gyrus		2
precuneus cortex		2
primary motor cortex		2
pubis	1		1
pulmonary artery				2
secondary auditory cortex		2
superior parietal cortex		2
supramarginal gyrus		2
thymus									2
white matter		2
C1 segment of cervical spinal cord	1
adipose tissue(adipose white tissue)			1
adrenal gland									1
agranular insular cortex		1
anterior cingulate cortex	1
arcuate nucleus of hypothalamus		1
bed nucleus of stria terminalis		1
bladder (urinary bladder)									1
body of caudate nucleus		1
brodmann area 43		1
cerebellar cortex					1
claustrum of brain		1
cuneus		1
dentate nucleus		1
distal epiphysis			1
distal epiphysis of femur			1
distal epiphysis of humerus			1
distal epiphysis of tibia			1
dorsal lateral geniculate nucleus		1
dorsal plus ventral thalamus		1
dorsolateral prefrontal cortex									1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))	1
esophagus									1
external globus pallidus		1
fastigial nucleus		1
forelimb muscle					1
frontal pole		1
gastric (mucosa of stomach)									1
globus pallidus					1
head of caudate nucleus		1
hindlimb muscle					1
hippocampal gyrus		1
inferior frontal gyrus		1
inferior parietal cortex					1
inferior temporal gyrus		1
insular gyrus		1
kidney (Cortex-Medulla)															1
kidney (cortex)															1
kidney (medulla)															1
kidney interstitium						1
lateral hypothalamic area		1
lateral occipital gyrus		1
lateral septal nucleus		1
left ventricle myocardium	1
lingual gyrus		1
locus coeruleus		1
mammillary body		1
medial dorsal nucleus of thalamus		1
medial geniculate nucleus		1
medial segment of precentral gyrus		1
medulla oblongata					1
midbrain					1
midbrain tectum		1
myelencephalon		1
olivary body		1
orbital gyrus		1
ovary									1
paraterminal gyrus		1
pericardium												1
pineal body		1
piriform cortex		1
pituitary gland		1
planum polare		1
planum temporale		1
postcentral gyrus		1
posterior cingulate cortex			1
primary somatosensory cortex		1
proximal epiphysis			1
proximal epiphysis of femur			1
proximal epiphysis of humerus			1
proximal epiphysis of tibia			1
pulvinar nucleus		1
raphe nuclei		1
red nucleus		1
renal glomerulus						1
sigmoid colon									1
small intestine									1
spleen									1
subiculum		1
substantia nigra pars reticulata		1
subthalamic nucleus		1
superior occipital gyrus		1
superior temporal gyrus					1
suprachiasmatic nucleus		1
temporal pole		1
transverse temporal gyrus		1
uncus of parahippocampal gyrus		1
ventral anterior nucleus of thalamus		1
primary cell
monocyte	54	85	15						1							1
Langerhans cell				51				21
pancreatic alpha cell			22				25			1
CD8-positive, alpha-beta T cell	4	33	2						1
pancreatic beta cell			13				16			1
naive thymus-derived CD4-positive, alpha-beta T cell	1	2	22						1
CD4-positive, alpha-beta memory T cell			22
endothelial cell of umbilical vein		17			2					2				1
epithelial cell of proximal tubule	1	10			1							1
macrophage			11						1
hepatocyte	5	4			1							1
skeletal muscle satellite cell	1	8									1
cardiac fibroblast		5			3							1
osteoblast	5		2		1				1
kidney epithelial cell	1	5			1							1
pancreatic acinar cell			4	3						1
peripheral blood mononuclear cell								8
mesenchymal stem cell		7
B cell	2		2						1
cardiac muscle cell		3			1							1
naive B cel	2		2						1
naive thymus-derived CD8-positive, alpha-beta T cell	2		2						1
retinal pigment epithelial cell		3			1							1
T follicular helper cell	2		2
T-helper 1 cell	2		2
T-helper 17 cell	2		2
T-helper 2 cell	2		2
central memory CD8-positive, alpha-beta T cell	2		2
effector CD4-positive, alpha-beta T cell	2		2
effector T cell	2		2
effector memory CD8-positive, alpha-beta T cell	2		2
gamma-delta T cell	2		2
kidney tubule cell	1				3
mature natural killer cell	2		2
memory B cell	2		2
memory T cell	2		2
memory regulatory T cell	2		2
naive regulatory T cell	2		2
regulatory T cell	2		2
skeletal muscle cell		2			1							1
gabaergic neuron			3
glutamatergic neuron			3
kidney glomerular epithelial cell	1				2
microglial cell/astrocyte			3
neutrophil	1	1							1
oligodendrocyte			3
renal cortical epithelial cell	1				1							1
CD4-positive, alpha-beta T cell									2
astrocyte of the cerebellum					1					1
brain microvascular endothelial cell					1					1
brain pericyte					1					1
cerebellar granule cell				2
choroid plexus epithelial cell					1							1
glomerular endothelial cell	1				1
glomerular visceral epithelial cell					2
immature natural killer cell	1		1
mesenchymal stem cell of adipose	1										1
myeloid dendritic cell	1		1
natural killer cell	1		1
plasma cell	1		1
plasmacytoid dendritic cell	1		1
skeletal muscle myoblast	1				1
Heart fetal (cardiac muscle cell)			1
Liver fetal (hepatocyte)			1
Purkinje cell				1
activated CD4-positive, alpha-beta T cell									1
adult endothelial progenitor cell									1
alternatively activated macrophage									1
astrocyte of the hippocampus					1
cardiac atrium fibroblast	1
cardiac ventricle fibroblast	1
chondrocytes										1
embryonic stem cell	1
endothelial cell of coronary artery	1
endothelial cell of hepatic sinusoid										1
erythroblast									1
hepatic stellate cell					1
inflammatory macrophage									1
kidney capillary endothelial cell					1
megakaryocyte									1
mesangial cell	1
pancreatic ductal cell				1
pancreatic stellate cell				1
pericardium fibroblast	1
smooth muscle cell of the brain vasculature					1
smooth muscle cell of the coronary artery	1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

files.file_type!

3039 results