Experiment Matrix

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BIOSAMPLE

	ASSAY
2949 results Clear Filters	ChIP-seq	total RNA-seq	ATAC-seq	DNase-seq	single cell RNA-seq	RNA microarray	WGBS	pCHi-C	RRBS	Hi-C	small RNA-seq	FAIRE-seq	snDrop-seq	snATAC-seq	DNAme array
tissue
islet of Langerhans	71	286	34	1				4	1	1		1		1
adipose tissue	2	382	3				3	1
liver	145	147		2	1		3	1	1	1	1
bone element						84
heart left ventricle	35	3	2	3	18		4	1	1	1
bone tissue		58
body of pancreas	35	3	4	4			2				2
kidney	27			13	6				1			1
coronary artery	5	1	36	2
tibial nerve	35	5	1	2
heart	14	4		18	1		1			1	1
subcutaneous abdominal adipose tissue	36						3
brain	20	1	1	14					1
heart right ventricle	13	1		1	17		2	1		1
skeletal muscle tissue	22	1	1		1				4		1			1
tibial artery	23	1	1	2
right cardiac atrium	6				18		1	1
pancreas	16	1		2			2	1	1	1		1
spleen	20		1	1			2	1
layer of hippocampus	23
aorta	13	1			4		2	1		1
subcutaneous adipose tissue	12	7	1			1					1
muscle of leg	7			13			1
retina		3	15	3
omental fat pad	11	5	1	2							1
ascending aorta	16	2		1
left cardiac atrium				1	18
right lobe of liver	10	3	1	2			1				2
thoracic aorta	16	2	1
caudate nucleus	15	1		1
muscle of arm				17
substantia nigra	16	1
temporal lobe	15	1									1
endocrine pancreas	16
right atrium auricular region	10	3	1	2
angular gyrus	15
cingulate gyrus	14
middle frontal area 46	14
pigmented layer of retina		2	12
germinal matrix	12
white adipose tissue	12
renal cortex interstitium				11
renal pelvis				10
right kidney				10
left kidney				9
cerebellum (Hemisphere)	4	1	1	1							1
frontal cortex		2		2							1	1
gastrocnemius medialis		1								4
psoas muscle		2						1		2
aortic valve					4
left renal cortex interstitium				4
left renal pelvis				4
pulmonary valve					4
putamen	2	1		1
right renal pelvis				4
superior frontal gyrus	4
tricuspid valve					4
Ammon's horn		1		1				1
cardiac atrium		1			2
cardiac ventricle		1			2
central medial thalamic nucleus	3
middle frontal gyrus	2			1
middle temporal gyrus	3
mitral valve					3
occipital lobe		1		1							1
right renal cortex interstitium				3
visceral abdominal adipose tissue		3
acetabular part of hip bone		1	1
amygdala	1	1
anterior cingulate gyrus	2
cerebellum		2
diencephalon		1									1
gyrus rectus	2
hypothalamus	1	1
ilium		1	1
interventricular septum					2
ischium		1	1
medial globus pallidus	2
metanephros		1									1
nucleus accumbens	1	1
occipital pole	2
parietal lobe		1									1
pons	1			1
posterior cingulate gyrus	2
precuneus cortex	2
primary motor cortex	2
pubis		1	1
pulmonary artery					2
secondary auditory cortex	2
superior parietal cortex	2
supramarginal gyrus	2
white matter	2
C1 segment of cervical spinal cord		1
adipose tissue(adipose white tissue)			1
adrenal gland								1
agranular insular cortex	1
anterior cingulate cortex		1
arcuate nucleus of hypothalamus	1
bed nucleus of stria terminalis	1
bladder (urinary bladder)								1
body of caudate nucleus	1
brodmann area 43	1
cerebellar cortex				1
claustrum of brain	1
cuneus	1
dentate nucleus	1
distal epiphysis			1
distal epiphysis of femur			1
distal epiphysis of humerus			1
distal epiphysis of tibia			1
dorsal lateral geniculate nucleus	1
dorsal plus ventral thalamus	1
dorsolateral prefrontal cortex								1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))		1
esophagus								1
external globus pallidus	1
fastigial nucleus	1
forelimb muscle				1
frontal pole	1
gastric (mucosa of stomach)								1
globus pallidus				1
head of caudate nucleus	1
hindlimb muscle				1
hippocampal gyrus	1
inferior frontal gyrus	1
inferior parietal cortex				1
inferior temporal gyrus	1
insular gyrus	1
kidney (Cortex-Medulla)													1
kidney (cortex)													1
kidney (medulla)													1
kidney interstitium						1
lateral hypothalamic area	1
lateral occipital gyrus	1
lateral septal nucleus	1
left ventricle myocardium		1
lingual gyrus	1
locus coeruleus	1
lung								1
mammillary body	1
medial dorsal nucleus of thalamus	1
medial geniculate nucleus	1
medial segment of precentral gyrus	1
medulla oblongata				1
midbrain				1
midbrain tectum	1
myelencephalon	1
olivary body	1
orbital gyrus	1
ovary								1
paraterminal gyrus	1
pericardium									1
pineal body	1
piriform cortex	1
pituitary gland	1
planum polare	1
planum temporale	1
postcentral gyrus	1
posterior cingulate cortex			1
primary somatosensory cortex	1
proximal epiphysis			1
proximal epiphysis of femur			1
proximal epiphysis of humerus			1
proximal epiphysis of tibia			1
pulvinar nucleus	1
raphe nuclei	1
red nucleus	1
renal glomerulus						1
sigmoid colon								1
small intestine								1
subiculum	1
substantia nigra pars reticulata	1
subthalamic nucleus	1
superior occipital gyrus	1
superior temporal gyrus				1
suprachiasmatic nucleus	1
temporal pole	1
thymus								1
transverse temporal gyrus	1
uncus of parahippocampal gyrus	1
ventral anterior nucleus of thalamus	1
primary cell
pancreatic beta cell	13	10	7		12
pancreatic alpha cell	13	10	6		12
pancreatic ductal cell	13	4	4		10
pancreatic acinar cell	8	4	5		12
naive thymus-derived CD4-positive, alpha-beta T cell	2	1	22
pancreatic endocrine cell	23
CD4-positive, alpha-beta memory T cell			22
endothelial cell of umbilical vein	17			2						2		1
skeletal muscle myoblast	15	1		2					1
monocyte	1	1	15												1
epithelial cell of proximal tubule	10	1		1					1
hepatocyte	4	5		1					1
macrophage			11
pancreatic delta cell					11
skeletal muscle satellite cell	8	1									1
cardiac fibroblast	5			3					1
osteoblast		5	2	1				1
pancreatic cell					9
pancreatic polypeptide-secreting cell					9
kidney epithelial cell	5	1		1					1
mesenchymal stem cell	7
mesenchymal cell					6
astrocyte of the cerebellum	3			1						1
brain microvascular endothelial cell	3			1						1
cardiac muscle cell	3			1					1
choroid plexus epithelial cell	3			1					1
retinal pigment epithelial cell	3			1					1
kidney tubule cell		1		3
pancreatic stellate cell					4
skeletal muscle cell	2			1					1
gabaergic neuron			3
glutamatergic neuron			3
kidney glomerular epithelial cell		1		2
microglial cell/astrocyte			3
oligodendrocyte			3
renal cortical epithelial cell		1		1					1
B cell			2
CD8-positive, alpha-beta T cell			2
T follicular helper cell			2
T-helper 1 cell			2
T-helper 17 cell			2
T-helper 2 cell			2
brain pericyte				1						1
central memory CD8-positive, alpha-beta T cell			2
cerebellar granule cell					2
co-expressing pancreatic endocrine cell					2
effector CD4-positive, alpha-beta T cell			2
effector T cell			2
effector memory CD8-positive, alpha-beta T cell			2
endothelial cell					2
enteroendocrine cell					2
gamma-delta T cell			2
glomerular endothelial cell		1		1
glomerular visceral epithelial cell				2
mast cell					2
mature natural killer cell			2
memory B cell			2
memory T cell			2
memory regulatory T cell			2
mesenchymal stem cell of adipose		1									1
naive B cel			2
naive regulatory T cell			2
naive thymus-derived CD8-positive, alpha-beta T cell			2
neutrophil	1	1
pancreatic epsilon cell					2
regulatory T cell			2
unclassified exocrine cell					2
unclassified pancreatic endocrine cell					2
Heart fetal (cardiac muscle cell)			1
Liver fetal (hepatocyte)			1
Purkinje cell					1
astrocyte of the hippocampus				1
cardiac atrium fibroblast		1
cardiac ventricle fibroblast		1
embryonic stem cell		1
endothelial cell of coronary artery		1
endothelial cell of hepatic sinusoid										1
hepatic stellate cell				1
immature natural killer cell			1
kidney capillary endothelial cell				1
mesangial cell		1
myeloid dendritic cell			1
natural killer cell			1
pericardium fibroblast		1
plasma cell			1
plasmacytoid dendritic cell			1
smooth muscle cell of the brain vasculature				1
smooth muscle cell of the coronary artery		1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

2949 results