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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
39
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
41
DNA accessibility
Date released
14
September, 2018
13
May, 2021
5
September, 2017
4
August, 2017
3
October, 2019
1
February, 2021
1
November, 2020
Available data
367
bam
366
bigWig
315
fastq
270
tsv
153
zippedFastqFolder
69
bed narrowPeak
52
bigBed narrowPeak
34
bed bed3+
28
bed broadPeak
bigBed broadPeak
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
41
Homo sapiens
Biosample type
213
tissue
41
primary cell
21
in vitro differentiated cells
11
cell line
Organ
24
epithelium
22
pancreas
2
connective tissue
1
blood vessel
1
liver
1
vasculature
1
vein
Project
41
AMP
Genome assembly (visualization)
41
hg19
39
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
ChIP-seq
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
41 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
monocyte
13
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
osteoblast
2
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
endothelial cell of umbilical vein
1
skeletal muscle myoblast
1
See all biosamples
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