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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
4
Hi-C
Assay category
60
DNA accessibility
52
Transcription
41
DNA methylation
4
3D chromatin structure
Date released
134
May, 2022
19
September, 2020
3
October, 2022
1
March, 2023
Available data
225
bigWig
180
bam
169
fastq
153
zippedFastqFolder
114
bed narrowPeak
102
tsv
84
tagAlign
4
hic
3
bedpe bed3+
3
cool
2
bed bed3+
Organism
157
Homo sapiens
Biosample type
157
primary cell
2
tissue
1
cell line
Organ
83
epithelium
83
pancreas
Project
156
HPAP
1
ITG
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
156
Klaus Kaestner, Upenn
AMP-T2D consortium
1
ITG
Audit category:
3
audit script error
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
157 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
Hi-C
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
22
1
pancreatic beta cell
16
13
1
pancreatic acinar cell
4
1
chondrocytes
1
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