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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
76
Transcription
60
DNA accessibility
41
DNA methylation
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
134
zippedFastqFolder
43
bam
43
bigWig
43
tsv
38
fastq
Organism
177
Homo sapiens
Biosample type
177
primary cell
72
tissue
Organ
113
epithelium
113
pancreas
2
connective tissue
Project
134
HPAP
43
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
134
Klaus Kaestner, Upenn
43
AMP-T2D consortium
BIOSAMPLE
ASSAY
177 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
3
25
22
pancreatic beta cell
3
16
13
pancreatic acinar cell
6
4
pancreatic delta cell
7
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
pancreatic cell
3
enteroendocrine cell
2
pancreatic stellate cell
2
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