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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
6
total RNA-seq
1
pCHi-C
Assay category
27
DNA accessibility
18
Transcription
6
DNA methylation
Date released
147
May, 2020
134
May, 2022
88
February, 2023
79
May, 2021
59
September, 2020
48
July, 2018
47
February, 2021
43
April, 2018
31
July, 2019
27
September, 2018
26
August, 2017
13
October, 2019
8
January, 2021
8
June, 2019
7
August, 2020
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
May, 2019
1
November, 2018
Available data
45
fastq
12
tsv
8
bam
7
bigWig
1
bed bed3
1
bed bed3+
bed narrowPeak
Organism
52
Homo sapiens
Biosample type
540
tissue
82
cell line
52
primary cell
28
in vitro differentiated cells
Organ
11
epithelium
6
pancreas
5
liver
2
connective tissue
Project
45
HPAP
7
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
45
Klaus Kaestner, Upenn
7
AMP-T2D consortium
Audit category:
27
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bed narrowPeak
BIOSAMPLE
ASSAY
52 results
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snATAC-seq
single cell RNA-seq
WGBS
total RNA-seq
pCHi-C
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
hepatocyte
5
osteoblast
1
1
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