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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
15
single cell RNA-seq
6
WGBS
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
28
DNA accessibility
16
Transcription
6
DNA methylation
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
48
fastq
10
tsv
6
bam
5
bigWig
1
bed bed3
1
bed bed3+
1
bed narrowPeak
Organism
51
Homo sapiens
Biosample type
545
tissue
96
cell line
51
primary cell
27
in vitro differentiated cells
Organ
9
epithelium
9
pancreas
3
connective tissue
Project
45
HPAP
6
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
45
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
27
audit script error
BIOSAMPLE
ASSAY
51 results
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snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
primary cell
Langerhans cell
27
12
pancreatic alpha cell
2
6
osteoblast
1
1
1
pancreatic acinar cell
1
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