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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
6
total RNA-seq
3
RRBS
Assay category
DNA binding
11
DNA accessibility
6
Transcription
3
DNA methylation
Date released
9
June, 2019
7
July, 2019
4
October, 2019
Available data
15
bam
15
bigWig
9
bed bed3+
9
bed broadPeak
9
bed narrowPeak
9
bigBed broadPeak
9
bigBed narrowPeak
6
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
272
tissue
20
primary cell
9
cell line
Organ
314
epithelium
276
pancreas
27
connective tissue
21
kidney
vasculature
12
brain
11
blood vessel
10
liver
8
blood
8
bodily fluid
8
heart
5
vein
4
musculature of body
2
adipose tissue
2
artery
2
eye
1
bone element
1
bone marrow
1
pericardium
Project
20
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
20 results
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DNase-seq
total RNA-seq
RRBS
primary cell
kidney tubule cell
3
1
epithelial cell of proximal tubule
1
1
1
kidney epithelial cell
1
1
1
kidney glomerular epithelial cell
2
1
renal cortical epithelial cell
1
1
1
glomerular endothelial cell
1
1
glomerular visceral epithelial cell
2
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