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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
DNase-seq
3
single cell RNA-seq
2
Hi-C
Assay category
3
DNA accessibility
3
DNA binding
3
Transcription
2
3D chromatin structure
Target of assay
4
control
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
5
July, 2019
3
June, 2019
3
November, 2017
Available data
11
bigWig
9
bam
5
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
3
fastq
3
tsv
2
hdf5
Organism
11
Homo sapiens
Biosample type
265
tissue
11
primary cell
Organ
406
epithelium
346
pancreas
39
connective tissue
vasculature
36
kidney
31
blood vessel
22
vein
21
brain
14
liver
14
musculature of body
13
heart
8
blood
8
bodily fluid
5
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
11
AMP
Genome assembly (visualization)
11
hg19
8
GRCh38
Lab
11
AMP-T2D consortium
organ_slims!
vasculature
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
DNase-seq
single cell RNA-seq
Hi-C
primary cell
astrocyte of the cerebellum
3
1
1
brain pericyte
1
1
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the hippocampus
1
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