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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
3
ATAC-seq
2
DNase-seq
1
RRBS
Assay category
40
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
38
histone
38
histone modification
22
narrow histone mark
16
broad histone mark
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
203
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
48
February, 2021
48
July, 2018
47
June, 2019
46
August, 2017
43
April, 2018
31
October, 2019
28
July, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
45
bam
45
bigWig
45
fastq
33
bed narrowPeak
19
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
46
Homo sapiens
Biosample type
255
tissue
60
in vitro differentiated cells
46
primary cell
Organ
29
pancreas
17
epithelium
Project
46
AMP
Genome assembly (visualization)
46
hg19
42
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
control
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
skeletal muscle myoblast
14
2
1
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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