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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
3
ATAC-seq
2
DNase-seq
1
RRBS
Assay category
31
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
38
histone
38
histone modification
narrow histone mark
16
broad histone mark
13
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
154
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
59
September, 2020
58
September, 2018
48
February, 2021
48
July, 2018
44
June, 2019
43
April, 2018
37
August, 2017
31
July, 2019
25
October, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
August, 2021
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
36
bam
36
fastq
24
bigWig
19
bed narrowPeak
13
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
7
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
37
Homo sapiens
Biosample type
234
tissue
52
in vitro differentiated cells
37
primary cell
Organ
25
pancreas
21
epithelium
Project
37
AMP
Genome assembly (visualization)
25
hg19
20
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
skeletal muscle myoblast
9
2
1
pancreatic alpha cell
9
1
pancreatic beta cell
9
1
pancreatic endocrine cell
4
pancreatic acinar cell
1
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