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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
17
ChIP-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
27
Transcription
17
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
narrow histone mark
Date released
154
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
59
September, 2020
58
September, 2018
48
February, 2021
48
July, 2018
44
June, 2019
43
April, 2018
37
August, 2017
31
July, 2019
25
October, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
August, 2021
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
58
fastq
57
bam
57
bigWig
31
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
58
Homo sapiens
Biosample type
58
primary cell
Organ
57
pancreas
50
epithelium
Project
58
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
58
AMP-T2D consortium
Audit category:
17
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
58 results
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total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic beta cell
10
4
pancreatic ductal cell
4
6
4
pancreatic alpha cell
10
3
pancreatic acinar cell
2
4
3
pancreatic endocrine cell
7
pancreatic cell
1
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