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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
136
total RNA-seq
2
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
Assay category
201
DNA binding
140
Transcription
43
DNA accessibility
4
3D chromatin structure
Date released
84
May, 2021
22
February, 2021
15
February, 2018
7
August, 2021
4
February, 2023
2
December, 2019
2
March, 2020
2
March, 2023
2
October, 2019
Available data
129
tsv
127
bam
127
bigWig
15
fastq
Organism
138
Homo sapiens
Biosample type
1227
tissue
436
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
9
connective tissue
6
embryo
2
epithelium
1
heart
Project
138
AMP
2
community
Genome assembly (visualization)
127
GRCh38
127
hg19
Lab
133
AMP-T2D consortium
5
Kyle Gaulton, UCSD
2
Anna Gloyn, Oxford
Audit category:
91
inconsistent ontology term
2
audit script error
BIOSAMPLE
ASSAY
140 results
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total RNA-seq
single cell RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
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stem cell
SB Ad3.1
1
1
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