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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
pCHi-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
ChIP-seq
1
GRO-seq
Assay category
2
Transcription
1
DNA binding
Target of assay
1
control
Date released
3
March, 2020
2
March, 2023
1
December, 2017
1
January, 2018
Available data
4
fastq
3
bam
3
bed bed3+
3
bigWig
3
tsv
bed narrowPeak
Organism
5
Homo sapiens
Biosample type
1706
tissue
764
primary cell
187
cell line
160
in vitro differentiated cells
7
stem cell
Project
5
AMP
2
community
Genome assembly (visualization)
1
GRCh38
1
hg18
1
hg19
Lab
5
AMP-T2D consortium
2
Anna Gloyn, Oxford
Audit category:
inconsistent ontology term
files.file_type!
bed narrowPeak
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
7 results
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pCHi-C
CRISPR RNA-seq
CRISPRi RNA-seq
ChIP-seq
GRO-seq
stem cell
SB Ad3.1
1
1
hESC
1
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
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