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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
pCHi-C
3
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
GRO-seq
Assay category
3
DNA binding
2
Transcription
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
4
March, 2020
3
December, 2017
2
March, 2023
1
January, 2018
Available data
4
fastq
4
tsv
3
bam
3
bed bed3+
3
bigWig
2
bed narrowPeak
Organism
8
Homo sapiens
Biosample type
2737
tissue
1087
primary cell
662
cell line
394
in vitro differentiated cells
10
stem cell
Organ
1
connective tissue
Project
8
AMP
2
community
Genome assembly (visualization)
3
GRCh38
3
hg19
1
hg18
Lab
8
AMP-T2D consortium
2
Anna Gloyn, Oxford
Audit category:
1
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
10 results
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pCHi-C
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
GRO-seq
stem cell
hESC
3
1
SB Ad3.1
1
1
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
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