Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
3
MeRIP-seq
Assay category
81
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
84
control
65
RNA binding protein
40
histone
40
histone modification
30
chromatin remodeller
20
broad histone mark
20
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
56
November, 2017
9
October, 2019
4
August, 2021
3
February, 2021
3
January, 2019
3
November, 2018
3
November, 2020
2
November, 2019
1
December, 2017
Available data
77
bam
63
fastq
13
bigWig
4
tagAlign
1
bed bed3+
Organism
84
Homo sapiens
Biosample type
187
tissue
83
cell line
37
in vitro differentiated cells
35
primary cell
1
stem cell
Organ
60
liver
11
pancreas
6
blood
6
bodily fluid
5
epithelium
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
84
AMP
Genome assembly (visualization)
14
hg19
1
GRCh38
Lab
77
AMP-T2D consortium
4
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
84 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
cell line
HepG2
60
GM12878
6
Panc1
6
EndoC_BH1
2
3
smooth muscle cell of the coronary artery
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
iPSC derived cell line
1
stem cell
hESC
1
See all biosamples
Download