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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
338
ChIP-seq
Assay category
338
DNA binding
309
Transcription
182
DNA accessibility
29
DNA methylation
5
3D chromatin structure
Target of assay
182
control
155
histone
155
histone modification
85
broad histone mark
70
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
92
August, 2017
76
November, 2017
48
October, 2019
29
October, 2018
23
May, 2020
22
May, 2019
15
April, 2019
12
December, 2017
9
October, 2017
4
December, 2018
4
September, 2017
3
November, 2018
1
January, 2019
Available data
217
bam
133
tagAlign
65
fastq
52
bed narrowPeak
52
bigBed narrowPeak
51
bigWig
Organism
337
Homo sapiens
Biosample type
338
tissue
79
in vitro differentiated cells
77
cell line
32
primary cell
Organ
95
brain
65
liver
55
connective tissue
54
adipose tissue
33
pancreas
18
limb
16
blood vessel
16
heart
16
vasculature
11
nerve
10
musculature of body
8
spleen
7
artery
7
kidney
4
gonad
4
ovary
2
eye
1
lymph node
Project
338
AMP
Genome assembly (visualization)
550
GRCh38
hg19
Lab
338
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
338 results
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ChIP-seq
tissue
liver
62
islet of Langerhans
40
subcutaneous abdominal adipose tissue
35
layer of hippocampus
22
caudate nucleus
14
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