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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
575
ChIP-seq
Assay category
917
Transcription
575
DNA binding
224
DNA accessibility
16
DNA methylation
Target of assay
487
histone modification
486
histone
253
narrow histone mark
233
broad histone mark
88
transcription factor
22
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
145
October, 2019
93
May, 2019
83
August, 2017
65
April, 2019
57
November, 2017
45
October, 2018
36
December, 2017
27
May, 2020
7
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
March, 2020
Available data
722
bam
575
bigWig
555
bed narrowPeak
377
bigBed narrowPeak
238
tagAlign
220
fastq
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
Organism
569
Homo sapiens
Biosample type
575
tissue
411
cell line
247
primary cell
115
in vitro differentiated cells
2
stem cell
Organ
163
brain
89
liver
82
pancreas
67
heart
57
blood vessel
57
vasculature
48
limb
24
nerve
21
artery
20
kidney
19
adipose tissue
19
connective tissue
19
musculature of body
12
spleen
1
pituitary gland
Project
573
AMP
2
T1D
Genome assembly (visualization)
544
GRCh38
524
hg19
Lab
575
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
25
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
575 results
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ChIP-seq
tissue
liver
82
heart left ventricle
29
islet of Langerhans
29
body of pancreas
26
tibial nerve
24
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