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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
998
total RNA-seq
174
single cell RNA-seq
16
small RNA-seq
Assay category
1188
Transcription
867
DNA binding
470
DNA accessibility
38
DNA methylation
16
3D chromatin structure
Date released
450
February, 2021
156
August, 2021
143
May, 2020
120
July, 2018
89
August, 2017
47
July, 2019
47
September, 2023
May, 2021
27
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
9
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
1012
tsv
885
bam
879
bigWig
103
fastq
72
txt
6
csv
Organism
1188
Homo sapiens
Biosample type
1188
tissue
381
primary cell
111
cell line
54
in vitro differentiated cells
2
stem cell
Organ
457
connective tissue
399
adipose tissue
254
pancreas
174
liver
115
kidney
107
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
1125
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
880
GRCh38
880
hg19
Lab
1040
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
11
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
month_released!
May, 2021
BIOSAMPLE
ASSAY
1188 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
262
liver
167
1
1
kidney
49
64
bone tissue
58
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