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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
640
total RNA-seq
174
single cell RNA-seq
14
small RNA-seq
Assay category
828
Transcription
794
DNA binding
462
DNA accessibility
32
DNA methylation
16
3D chromatin structure
Date released
156
August, 2021
143
May, 2020
120
July, 2018
89
August, 2017
64
February, 2021
47
September, 2023
39
May, 2021
37
July, 2019
27
May, 2022
23
February, 2020
22
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
9
March, 2020
6
April, 2018
3
May, 2023
1
December, 2019
Available data
652
tsv
527
bam
521
bigWig
103
fastq
72
txt
6
csv
Organism
828
Homo sapiens
Biosample type
828
tissue
434
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
457
connective tissue
adipose tissue
291
pancreas
174
liver
115
kidney
109
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
765
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
521
GRCh38
521
hg19
Lab
679
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
828 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
298
liver
167
1
1
kidney
49
64
bone tissue
58
heart left ventricle
3
18
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