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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
907
ChIP-seq
260
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
1037
Transcription
Date released
444
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
50
August, 2021
40
May, 2021
31
July, 2019
29
March, 2020
26
May, 2022
26
October, 2019
25
February, 2020
19
November, 2019
13
February, 2023
6
April, 2018
1
May, 2023
Available data
951
tsv
907
bam
901
bigWig
103
fastq
59
txt
Organism
1062
Homo sapiens
Biosample type
1062
tissue
264
primary cell
141
in vitro differentiated cells
119
cell line
4
stem cell
Organ
456
connective tissue
398
adipose tissue
290
pancreas
171
liver
62
bone element
50
kidney
23
eye
19
brain
18
heart
8
blood vessel
8
vasculature
7
limb
6
musculature of body
5
nerve
4
skeleton
2
artery
2
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
1054
AMP
8
T1D
Genome assembly (visualization)
902
GRCh38
902
hg19
Lab
979
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
13
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
1062 results
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Clear Filters
total RNA-seq
pCHi-C
tissue
adipose tissue
382
1
islet of Langerhans
298
4
liver
167
1
bone tissue
58
kidney
49
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