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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
38
ATAC-seq
26
total RNA-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
48
DNA binding
39
DNA accessibility
27
Transcription
Target of assay
31
transcription factor
12
control
5
histone
5
histone modification
3
broad histone mark
2
RNA binding protein
2
chromatin remodeller
2
narrow histone mark
Date released
234
October, 2019
195
August, 2017
163
June, 2019
130
August, 2021
115
May, 2019
93
February, 2021
91
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
66
May, 2022
50
May, 2020
48
December, 2017
47
September, 2023
40
May, 2024
30
July, 2019
26
November, 2018
23
October, 2017
21
November, 2019
19
April, 2020
15
May, 2023
12
March, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
July, 2018
4
November, 2020
2
January, 2018
2
May, 2021
1
August, 2022
1
December, 2019
Available data
74
bed narrowPeak
72
bam
72
fastq
56
bigWig
36
bigBed narrowPeak
7
txt
1
bed bed3+
Organism
114
Homo sapiens
Biosample type
134
primary cell
114
tissue
43
in vitro differentiated cells
3
stem cell
Organ
88
liver
24
pancreas
2
musculature of body
Project
114
AMP
Genome assembly (visualization)
75
hg19
36
GRCh38
Lab
50
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
1
audit script error
files.file_type!
tsv
BIOSAMPLE
ASSAY
114 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
liver
38
20
20
islet of Langerhans
18
6
right lobe of liver
10
skeletal muscle tissue
1
1
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