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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
66
ATAC-seq
Assay category
242
DNA accessibility
Target of assay
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
Date released
163
June, 2019
64
August, 2021
9
November, 2018
4
October, 2019
1
March, 2019
1
October, 2017
Available data
1442
bam
1246
bigWig
1076
tsv
460
bed narrowPeak
304
fastq
249
bigBed narrowPeak
193
bed bed3+
178
bed broadPeak
176
bigBed broadPeak
157
txt
64
xls
52
tagAlign
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
Organism
242
Homo sapiens
Biosample type
242
tissue
45
cell line
33
primary cell
1
in vitro differentiated cells
Organ
132
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
8
pancreas
5
blood vessel
5
vasculature
4
artery
3
eye
3
liver
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
242
AMP
Genome assembly (visualization)
241
GRCh38
161
hg19
Lab
176
AMP-T2D consortium
64
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
242 results
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DNase-seq
ATAC-seq
tissue
kidney
13
64
heart
18
muscle of arm
17
brain
14
muscle of leg
13
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