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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
32
ChIP-seq
1
ATAC-seq
Assay category
177
DNA accessibility
32
DNA binding
Target of assay
32
histone
32
histone modification
18
broad histone mark
14
narrow histone mark
Date released
163
June, 2019
26
August, 2017
9
November, 2018
6
November, 2017
October, 2017
4
October, 2019
1
March, 2019
Available data
1892
bam
1758
bigWig
1076
tsv
972
bed narrowPeak
555
bigBed narrowPeak
360
fastq
224
tagAlign
209
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
203
Homo sapiens
Biosample type
209
tissue
59
cell line
49
primary cell
1
in vitro differentiated cells
Organ
68
kidney
45
musculature of body
36
limb
33
brain
27
heart
19
pancreas
18
ureter
5
blood vessel
5
vasculature
4
artery
3
adipose tissue
3
connective tissue
3
eye
3
liver
2
nerve
1
spleen
Project
209
AMP
Genome assembly (visualization)
192
hg19
187
GRCh38
Lab
208
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
October, 2017
BIOSAMPLE
ASSAY
209 results
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DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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