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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
DNase-seq
19
ChIP-seq
1
ATAC-seq
Assay category
145
DNA accessibility
19
DNA binding
Target of assay
19
histone
19
histone modification
10
broad histone mark
9
narrow histone mark
Date released
131
June, 2019
13
August, 2017
9
November, 2018
6
November, 2017
October, 2017
4
October, 2019
1
March, 2019
Available data
1848
bam
1701
bigWig
1069
tsv
921
bed narrowPeak
517
bigBed narrowPeak
358
fastq
209
tagAlign
172
bed bed3+
164
bed broadPeak
156
txt
144
bigBed broadPeak
64
xls
22
bed bedMethyl
22
bigBed bedMethyl
9
hic
8
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
158
Homo sapiens
Biosample type
164
tissue
59
cell line
48
primary cell
1
in vitro differentiated cells
Organ
68
kidney
musculature of body
36
limb
33
brain
27
heart
19
pancreas
18
ureter
5
blood vessel
5
vasculature
4
artery
3
adipose tissue
3
connective tissue
3
eye
3
liver
2
nerve
1
spleen
Project
164
AMP
Genome assembly (visualization)
155
GRCh38
147
hg19
Lab
163
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
1
inconsistent assembly
organ_slims!
musculature of body
month_released!
October, 2017
BIOSAMPLE
ASSAY
164 results
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DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
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