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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
377
ChIP-seq
177
DNase-seq
4
FAIRE-seq
ATAC-seq
Assay category
377
DNA binding
181
DNA accessibility
Target of assay
312
histone
312
histone modification
204
broad histone mark
108
narrow histone mark
65
transcription factor
20
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
163
June, 2019
93
May, 2019
64
April, 2019
57
November, 2017
46
October, 2019
45
October, 2018
36
December, 2017
20
August, 2017
17
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
July, 2019
Available data
1843
bam
1689
bigWig
1075
tsv
736
bed narrowPeak
558
bigBed narrowPeak
348
fastq
238
tagAlign
211
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
1
bedpe
1
tagAlign bed3+
Organism
552
Homo sapiens
Biosample type
558
tissue
355
cell line
87
primary cell
15
in vitro differentiated cells
Organ
116
brain
88
heart
87
kidney
84
limb
62
blood vessel
62
pancreas
62
vasculature
48
liver
38
musculature of body
26
nerve
25
artery
18
ureter
13
spleen
8
adipose tissue
8
connective tissue
3
eye
Project
558
AMP
Genome assembly (visualization)
553
GRCh38
490
hg19
Lab
558
AMP-T2D consortium
Audit category:
27
inconsistent control
1
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
558 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
liver
38
2
kidney
18
13
1
heart left ventricle
28
3
body of pancreas
26
4
tibial nerve
24
2
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