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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
329
ChIP-seq
141
DNase-seq
4
FAIRE-seq
3
ATAC-seq
Assay category
329
DNA binding
148
DNA accessibility
Target of assay
264
histone
264
histone modification
170
broad histone mark
94
narrow histone mark
65
transcription factor
20
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
131
June, 2019
87
May, 2019
64
April, 2019
57
November, 2017
45
October, 2018
36
December, 2017
22
August, 2017
17
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
July, 2019
1
October, 2019
Available data
1793
bam
1641
bigWig
1069
tsv
852
bed narrowPeak
477
bigBed narrowPeak
377
fastq
238
tagAlign
177
bed broadPeak
169
bed bed3+
157
txt
140
bigBed broadPeak
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
471
Homo sapiens
Biosample type
477
tissue
355
cell line
109
primary cell
17
in vitro differentiated cells
Organ
116
brain
88
heart
87
kidney
limb
62
blood vessel
62
pancreas
62
vasculature
49
liver
38
musculature of body
26
nerve
25
artery
18
ureter
13
spleen
10
adipose tissue
10
connective tissue
3
eye
Project
477
AMP
Genome assembly (visualization)
472
GRCh38
409
hg19
Lab
477
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
limb
BIOSAMPLE
ASSAY
477 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
ATAC-seq
tissue
liver
38
2
kidney
18
13
1
heart left ventricle
28
3
body of pancreas
26
4
heart
7
18
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