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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
286
ChIP-seq
Assay category
286
DNA binding
Target of assay
533
histone modification
532
histone
286
narrow histone mark
246
broad histone mark
173
control
83
transcription factor
19
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
230
bigWig
228
bed narrowPeak
221
bam
110
tagAlign
86
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
284
Homo sapiens
Biosample type
286
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
32
pancreas
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
9
musculature of body
8
heart
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
kidney
2
spleen
1
lymph node
1
pituitary gland
Project
284
AMP
2
T1D
Genome assembly (visualization)
216
hg19
214
GRCh38
Lab
286
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
April, 2019
BIOSAMPLE
ASSAY
286 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
subcutaneous abdominal adipose tissue
11
layer of hippocampus
8
tibial nerve
8
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