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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
282
ChIP-seq
Assay category
282
DNA binding
Target of assay
566
histone modification
565
histone
283
broad histone mark
282
narrow histone mark
164
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
226
bigWig
224
bed narrowPeak
216
bam
108
bigBed narrowPeak
83
tagAlign
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
280
Homo sapiens
Biosample type
282
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
32
pancreas
23
heart
18
blood vessel
18
vasculature
17
liver
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
280
AMP
2
T1D
Genome assembly (visualization)
217
GRCh38
212
hg19
Lab
282
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
May, 2020
BIOSAMPLE
ASSAY
282 results
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ChIP-seq
tissue
islet of Langerhans
37
liver
15
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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