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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
50
total RNA-seq
14
single cell RNA-seq
6
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
70
DNA accessibility
64
Transcription
2
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
234
October, 2019
193
May, 2020
137
August, 2021
136
June, 2019
120
July, 2018
94
May, 2019
82
November, 2017
74
October, 2018
66
May, 2022
59
February, 2023
57
July, 2019
48
December, 2017
47
September, 2023
40
November, 2019
38
May, 2021
33
March, 2020
26
November, 2018
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
64
bed narrowPeak
64
xls
57
txt
7
tsv
1
bedpe bed3+
1
hic
Organism
136
Homo sapiens
Biosample type
137
tissue
44
cell line
42
in vitro differentiated cells
4
primary cell
Organ
128
kidney
heart
6
blood vessel
6
vasculature
2
artery
2
pancreas
1
adipose tissue
1
connective tissue
Project
137
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
128
Katalin Susztak, Upenn
7
AMP-T2D consortium
2
Bing Ren, UCSD
organ_slims!
heart
BIOSAMPLE
ASSAY
137 results
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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
64
49
8
6
1
aorta
4
islet of Langerhans
1
1
pulmonary artery
2
subcutaneous adipose tissue
1
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