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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
115
ChIP-seq
84
RNA microarray
8
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
115
DNA binding
8
DNA accessibility
Target of assay
89
histone
89
histone modification
56
broad histone mark
33
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
567
bam
537
bigWig
452
tsv
101
bed narrowPeak
93
bigBed narrowPeak
89
txt
6
csv
Organism
660
Homo sapiens
Biosample type
660
tissue
96
cell line
53
primary cell
26
in vitro differentiated cells
Organ
444
connective tissue
386
adipose tissue
150
bone element
50
blood vessel
50
vasculature
28
brain
21
heart
13
limb
8
kidney
8
skeleton
7
musculature of body
5
artery
2
pancreas
1
liver
Project
660
AMP
Genome assembly (visualization)
545
hg19
544
GRCh38
Lab
660
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
660 results
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Clear Filters
total RNA-seq
ChIP-seq
RNA microarray
ATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
ascending aorta
16
thoracic aorta
16
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