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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
total RNA-seq
4
ATAC-seq
1
Hi-C
1
pCHi-C
Assay category
64
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
63
tsv
39
bam
38
bigWig
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
70
Homo sapiens
Biosample type
206
primary cell
132
in vitro differentiated cells
70
tissue
21
cell line
Organ
43
pancreas
12
brain
5
heart
3
blood vessel
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
1
thymus
Project
69
AMP
1
T1D
Genome assembly (visualization)
41
hg19
40
GRCh38
Lab
63
AMP-T2D consortium
2
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
70 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
36
4
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
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