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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
total RNA-seq
4
ATAC-seq
1
Hi-C
Assay category
23
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
545
February, 2021
258
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
131
June, 2019
120
July, 2018
108
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
70
July, 2019
64
May, 2022
48
December, 2017
47
September, 2023
40
May, 2021
40
November, 2019
35
March, 2020
26
November, 2018
23
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
23
tsv
1
bam
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
28
Homo sapiens
Biosample type
28
tissue
Organ
12
brain
6
pancreas
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
28
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
23
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
28 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
tissue
islet of Langerhans
4
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
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