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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
pCHi-C
7
Hi-C
2
ATAC-seq
2
total RNA-seq
Assay category
7
3D chromatin structure
2
DNA accessibility
2
Transcription
Date released
229
August, 2021
114
August, 2017
95
February, 2023
93
February, 2021
56
October, 2019
47
September, 2023
42
May, 2022
31
March, 2020
25
February, 2020
19
April, 2020
15
May, 2023
13
July, 2019
13
November, 2017
8
January, 2021
8
October, 2017
4
July, 2018
4
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
2
May, 2021
1
April, 2019
1
August, 2022
1
November, 2019
Available data
28
tsv
11
bigWig
bam
7
bedpe bed3+
7
hic
2
bed narrowPeak
Organism
31
Homo sapiens
Biosample type
31
tissue
6
cell line
6
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
6
pancreas
5
heart
3
musculature of body
2
blood vessel
2
brain
2
intestine
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
29
AMP
2
T1D
Genome assembly (visualization)
9
hg19
Lab
31
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
31 results
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pCHi-C
Hi-C
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
2
2
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
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