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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
pCHi-C
9
total RNA-seq
7
Hi-C
2
ATAC-seq
Assay category
9
Transcription
7
3D chromatin structure
2
DNA accessibility
Date released
537
February, 2021
218
August, 2017
166
May, 2020
165
August, 2021
120
July, 2018
91
October, 2019
70
July, 2019
47
September, 2023
40
May, 2021
38
March, 2020
32
February, 2023
29
October, 2018
28
May, 2022
25
February, 2020
24
November, 2017
22
May, 2019
20
November, 2019
19
April, 2020
15
April, 2019
15
May, 2023
12
December, 2017
11
October, 2017
9
November, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
28
tsv
11
bigWig
9
bam
7
bedpe bed3+
7
hic
bed narrowPeak
Organism
38
Homo sapiens
Biosample type
38
tissue
10
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
7
heart
7
pancreas
5
musculature of body
3
blood vessel
3
liver
3
vasculature
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
36
AMP
2
T1D
Genome assembly (visualization)
16
hg19
7
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
38 results
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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
tissue
psoas muscle
1
2
2
islet of Langerhans
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
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