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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
pCHi-C
9
total RNA-seq
7
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
9
Transcription
7
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
229
August, 2021
193
May, 2020
156
October, 2019
138
June, 2019
120
July, 2018
94
February, 2023
87
May, 2019
80
April, 2019
74
October, 2018
66
July, 2019
66
May, 2022
48
December, 2017
47
September, 2023
40
May, 2021
40
November, 2019
38
March, 2020
24
November, 2018
19
April, 2020
15
May, 2023
13
February, 2020
8
January, 2021
7
December, 2018
7
January, 2019
7
October, 2017
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
26
tsv
11
bigWig
9
bam
7
bedpe bed3+
7
hic
2
bed narrowPeak
Organism
38
Homo sapiens
Biosample type
38
tissue
11
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
9
pancreas
7
heart
5
musculature of body
3
blood vessel
3
liver
3
vasculature
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
34
AMP
4
T1D
Genome assembly (visualization)
18
hg19
9
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
38 results
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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
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