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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ATAC-seq
39
total RNA-seq
7
ChIP-seq
3
snATAC-seq
2
single cell RNA-seq
Assay category
120
DNA accessibility
41
Transcription
7
DNA binding
Target of assay
4
control
3
transcription factor
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
104
bed narrowPeak
31
bam
31
fastq
23
bigWig
11
txt
5
bed bed3
4
tsv
3
bigBed narrowPeak
1
bed bed3+
Organism
168
Homo sapiens
Biosample type
222
primary cell
168
tissue
34
cell line
16
in vitro differentiated cells
Organ
42
pancreas
40
liver
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
epithelium
8
bone element
8
skeleton
7
spleen
2
musculature of body
1
adipose tissue
1
brain
1
connective tissue
Project
150
AMP
18
T1D
Genome assembly (visualization)
75
hg19
38
GRCh38
Lab
86
AMP-T2D consortium
42
Kyle Gaulton, UCSD
40
Karen Mohlke, UNC
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
168 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
snATAC-seq
single cell RNA-seq
tissue
islet of Langerhans
29
11
2
liver
20
20
coronary artery
35
retina
15
2
pigmented layer of retina
12
2
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