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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
38
ATAC-seq
26
total RNA-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
74
DNA binding
39
DNA accessibility
27
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
98
bam
83
bed narrowPeak
82
fastq
65
bigWig
45
bigBed narrowPeak
7
txt
1
bed bed3+
Organism
140
Homo sapiens
Biosample type
140
tissue
136
primary cell
Organ
75
pancreas
40
liver
23
adipose tissue
23
connective tissue
2
musculature of body
Project
140
AMP
Genome assembly (visualization)
84
hg19
45
GRCh38
Lab
76
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
1
audit script error
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
140 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
liver
20
20
body of pancreas
33
islet of Langerhans
18
6
endocrine pancreas
16
subcutaneous adipose tissue
12
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