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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
total RNA-seq
124
ChIP-seq
38
ATAC-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
170
Transcription
124
DNA binding
39
DNA accessibility
Target of assay
57
histone
57
histone modification
52
control
38
narrow histone mark
19
broad histone mark
15
transcription factor
11
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
291
bam
235
bigWig
143
tsv
110
bed narrowPeak
82
fastq
50
tagAlign
45
bigBed narrowPeak
7
txt
1
bed bed3+
Organism
333
Homo sapiens
Biosample type
333
tissue
283
primary cell
1
cell line
Organ
233
liver
75
pancreas
23
adipose tissue
23
connective tissue
2
musculature of body
Project
333
AMP
Genome assembly (visualization)
254
hg19
207
GRCh38
Lab
269
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
1
audit script error
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
333 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
snATAC-seq
tissue
liver
163
50
20
body of pancreas
33
islet of Langerhans
6
18
endocrine pancreas
16
subcutaneous adipose tissue
12
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