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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ATAC-seq
19
total RNA-seq
10
ChIP-seq
9
DNase-seq
6
WGBS
1
FAIRE-seq
1
Hi-C
Assay category
30
DNA accessibility
19
Transcription
10
DNA binding
6
DNA methylation
1
3D chromatin structure
Target of assay
7
transcription factor
3
control
3
other context
3
other post-translational modification
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
65
bam
42
bigWig
37
bed narrowPeak
26
fastq
19
tsv
17
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
bedpe bed3+
1
hic
Organism
66
Homo sapiens
Biosample type
77
cell line
66
tissue
5
in vitro differentiated cells
1
primary cell
Organ
46
pancreas
9
spleen
7
liver
2
adipose tissue
2
brain
2
connective tissue
Project
66
AMP
Genome assembly (visualization)
61
GRCh38
57
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
Hi-C
tissue
islet of Langerhans
19
19
1
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
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