Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
376
ChIP-seq
177
DNase-seq
2
ATAC-seq
Assay category
376
DNA binding
179
DNA accessibility
Target of assay
311
histone
311
histone modification
204
broad histone mark
107
narrow histone mark
65
transcription factor
20
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
163
June, 2019
92
May, 2019
64
April, 2019
57
November, 2017
46
October, 2019
45
October, 2018
36
December, 2017
21
August, 2017
16
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
Available data
1712
bigWig
1703
bam
917
tsv
883
bed narrowPeak
555
bigBed narrowPeak
280
fastq
204
bed bed3+
191
bed broadPeak
176
bigBed broadPeak
116
tagAlign
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
1
tagAlign bed3+
Organism
549
Homo sapiens
Biosample type
555
tissue
323
cell line
105
primary cell
15
in vitro differentiated cells
Organ
115
brain
88
heart
86
kidney
83
limb
62
blood vessel
62
vasculature
60
pancreas
49
liver
37
musculature of body
26
nerve
25
artery
18
ureter
13
spleen
9
adipose tissue
9
connective tissue
3
eye
Project
555
AMP
Genome assembly (visualization)
555
GRCh38
493
hg19
Lab
555
AMP-T2D consortium
Audit category:
27
inconsistent control
1
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
pericardium
BIOSAMPLE
ASSAY
555 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
tissue
liver
38
2
heart left ventricle
28
3
kidney
18
13
body of pancreas
26
4
tibial nerve
24
2
+ See 53 more…
See all biosamples
Download