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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1030
total RNA-seq
794
ChIP-seq
222
ATAC-seq
173
DNase-seq
168
single cell RNA-seq
87
RNA microarray
28
snATAC-seq
25
WGBS
24
pCHi-C
16
small RNA-seq
15
Hi-C
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
173
DNA accessibility
Date released
160
June, 2019
9
November, 2018
2
August, 2017
2
October, 2019
Available data
172
bam
172
bed narrowPeak
172
bigBed narrowPeak
172
bigWig
171
bed bed3+
171
bed broadPeak
171
bigBed broadPeak
10
fastq
Organism
173
Homo sapiens
Biosample type
173
tissue
25
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
5
blood vessel
vasculature
4
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
173
AMP
Genome assembly (visualization)
172
GRCh38
156
hg19
Lab
173
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
173 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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