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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
761
ChIP-seq
633
total RNA-seq
216
ATAC-seq
171
DNase-seq
168
single cell RNA-seq
86
RNA microarray
28
snATAC-seq
23
pCHi-C
19
WGBS
15
Hi-C
14
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
171
DNA accessibility
Date released
159
June, 2019
8
November, 2018
2
August, 2017
2
October, 2019
Available data
170
bam
170
bed narrowPeak
170
bigBed narrowPeak
170
bigWig
169
bed bed3+
169
bed broadPeak
169
bigBed broadPeak
9
fastq
Organism
171
Homo sapiens
Biosample type
171
tissue
25
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
5
blood vessel
vasculature
4
artery
4
liver
3
eye
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
171
AMP
Genome assembly (visualization)
170
GRCh38
154
hg19
Lab
171
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
adipose tissue
BIOSAMPLE
ASSAY
171 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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