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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ATAC-seq
101
single cell RNA-seq
76
total RNA-seq
7
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
177
Transcription
109
DNA accessibility
2
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
223
August, 2021
216
October, 2019
193
May, 2020
160
June, 2019
120
July, 2018
82
November, 2017
80
April, 2019
74
October, 2018
70
July, 2019
66
May, 2022
65
May, 2019
60
February, 2023
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
40
November, 2019
37
March, 2020
26
November, 2018
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
102
bed narrowPeak
93
tsv
64
txt
64
xls
24
bam
24
fastq
20
bigWig
1
bed bed3+
1
bedpe bed3+
1
hic
Organism
288
Homo sapiens
Biosample type
289
tissue
138
primary cell
44
cell line
42
in vitro differentiated cells
Organ
128
kidney
92
heart
40
liver
26
pancreas
6
blood vessel
vasculature
2
artery
2
musculature of body
1
adipose tissue
1
connective tissue
Project
289
AMP
Genome assembly (visualization)
64
GRCh38
40
hg19
Lab
128
Katalin Susztak, Upenn
95
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
Audit category:
1
audit script error
organ_slims!
vasculature
BIOSAMPLE
ASSAY
289 results
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Clear Filters
ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
64
8
49
6
1
liver
20
20
islet of Langerhans
18
7
1
heart left ventricle
18
left cardiac atrium
18
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