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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
12
ChIP-seq
9
ATAC-seq
2
WGBS
1
DNase-seq
Assay category
58
Transcription
12
DNA binding
10
DNA accessibility
2
DNA methylation
Target of assay
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
66
February, 2021
6
January, 2019
6
November, 2018
3
December, 2018
1
October, 2017
Available data
82
bam
74
bigWig
58
tsv
22
bed narrowPeak
16
fastq
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
82
Homo sapiens
Biosample type
82
tissue
Organ
480
connective tissue
422
adipose tissue
386
pancreas
238
liver
203
brain
191
heart
165
kidney
105
blood vessel
105
vasculature
96
limb
66
bone element
62
artery
42
musculature of body
31
nerve
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
82
AMP
Genome assembly (visualization)
84
hg19
82
GRCh38
Lab
82
AMP-T2D consortium
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
ChIP-seq
ATAC-seq
WGBS
DNase-seq
tissue
bone tissue
58
spleen
12
1
2
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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