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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
5
total RNA-seq
4
single cell RNA-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
45
DNA binding
9
Transcription
2
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Target of assay
34
histone
34
histone modification
22
broad histone mark
12
narrow histone mark
9
control
2
RNA binding protein
2
transcription factor
Date released
45
May, 2019
6
July, 2019
4
August, 2021
3
March, 2020
1
February, 2020
1
June, 2019
Available data
53
bam
43
bigWig
38
bed narrowPeak
37
bigBed narrowPeak
10
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bedpe bed3+
1
bigBed bedMethyl
1
bigBed broadPeak
1
hic
Organism
60
Homo sapiens
Biosample type
60
tissue
35
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
299
kidney
273
heart
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
60
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
60
AMP-T2D consortium
organ_slims!
artery
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
total RNA-seq
single cell RNA-seq
WGBS
ATAC-seq
DNase-seq
Hi-C
pCHi-C
tissue
aorta
13
1
4
2
1
1
ascending aorta
16
2
1
thoracic aorta
16
2
1
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