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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
307
ChIP-seq
Assay category
307
DNA binding
Target of assay
587
histone modification
586
histone
307
narrow histone mark
279
broad histone mark
186
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
48
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
251
bigWig
249
bed narrowPeak
241
bam
108
tagAlign
106
bigBed narrowPeak
26
fastq
13
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
307
Homo sapiens
Biosample type
307
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
30
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
305
AMP
2
T1D
Genome assembly (visualization)
237
hg19
234
GRCh38
Lab
307
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
307 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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