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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
8
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
41
DNA accessibility
8
DNA binding
4
Transcription
Target of assay
20
histone
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
8
October, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
42
bed narrowPeak
14
bam
7
bigWig
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
53
Homo sapiens
Biosample type
66
cell line
53
tissue
2
primary cell
Organ
514
connective tissue
456
adipose tissue
432
pancreas
291
liver
279
kidney
213
heart
158
bone element
81
brain
79
blood vessel
79
vasculature
73
limb
57
musculature of body
54
eye
53
artery
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
15
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
42
GRCh38
7
hg19
Lab
53
AMP-T2D consortium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
3
2
1
tibial artery
1
5
2
1
pulmonary artery
2
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