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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
22
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
41
DNA accessibility
22
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
22
October, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
56
bed narrowPeak
28
bam
21
bigWig
19
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
67
Homo sapiens
Biosample type
67
tissue
66
cell line
2
primary cell
Organ
534
connective tissue
476
adipose tissue
473
pancreas
317
liver
289
kidney
250
heart
158
bone element
151
brain
115
blood vessel
115
vasculature
107
limb
73
musculature of body
67
artery
54
eye
35
nerve
23
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
67
AMP
Genome assembly (visualization)
56
GRCh38
21
hg19
Lab
67
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
67 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
3
2
1
tibial artery
1
19
2
1
pulmonary artery
2
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